Migrate File Server to SharePoint Online – Top 3 Methods

Mack John ~ Published: May 21st, 2025 ~ SharePoint ~ 6 Minutes Reading

Ready to migrate file server to SharePoint Online but unsure which method to use? Don’t worry! We are here to guide you through the complete file server to SharePoint Online migration in minutes. As SharePoint migration experts, we’ll walk you through multiple proven solutions so you can choose the best one for your needs. Without further ado, let’s start! 

Table of Contents

Pre-Migration Checklist

This migration becomes complicated if you don’t follow the steps correctly. Therefore, let’s verify these prerequisite steps to get the desired results from this transition: 

How to Migrate File Server to SharePoint Online – Step by Step

As per our experience and expertise, we’ve successfully guided over 50 enterprises through their file server to SharePoint Online migration using three practical methods. Each completed the transition without disruption. Here’s the proof:

Migrate File Server to SharePoint Online
In the following sections, we will explore all three proven solutions step-by-step, i.e.

Method 1. Microsoft Migration Manager

This is an in-built tool available in Microsoft 365. This is a genuinely quick and simple solution for this migration. Using Migration Manager, you can preserve ACLs. Here’s how: 

  • Open Microsoft 365 Admin Center > Migration Manager.
  • Download & install the agent on the file server.
  • Add file share locations to the migration dashboard.
  • Map destinations to SharePoint sites/libraries.
  • Run a pre-scan to address errors.
  • Execute migration.

See, this is the most straightforward and cost-effective solution. Still, we have two more solution let’s take a look on them!

Method 2. Migrate File Server to SharePoint Online Via OneDrive Sync

This is not the direct solution, but it still works for many of the companies, so go through the steps given below:

Steps:

  • Sync the target SharePoint document library with the OneDrive client.
  • Copy/paste files from the local file server location to the synced folder.
  • Allow sync to complete.
  • Remove old file server content after validation. This step is necessary.

These instructions are so easy to follow. Additionally, this technique is free, so give it a chance. If it doesn’t deliver the results you’re looking for, then don’t worry, you have two more options to opt for. 

Method 3. File Server to SharePoint Online Migration Using PowerShell + PnP PowerShell or Scripts

First thing is, most of the users don’t even know what PowerShell is. We recommend that those users don’t try this method, as there is a chance of data loss during the migration. Don’t worry, if you’re not comfortable with scripting, then you can opt for any of above mentioned method to migrate file server to SharePoint Online. They’re beginner-friendly and just as effective. 

For technical users, this approach is best among all of them, as it offers automation.

Prerequisites:

Now, run the commands given below to proceed with the file server to SharePoint Online migration:

Install-Module PnP.PowerShell -Scope CurrentUser
Import-Module PnP.PowerShell
Connect-PnPOnline -Url "https://macktenant.sharepoint.com/sites/macksite" -Interactive
# Local file server folder
$sourcePath = "C:\CompanyFiles"  
# SharePoint library name
$targetLibrary = "Shared Documents"  
Get-ChildItem -Path $sourcePath -Recurse | ForEach-Object {
    if (-not $_.PSIsContainer) {
        $filePath = $_.FullName
        $relativePath = $filePath.Substring($sourcePath.Length + 1)
        $folderPath = Split-Path $relativePath -Parent
        $destinationFolder = "/$targetLibrary/$folderPath"
        # Ensure the folder exists
        Ensure-PnPFolder -SiteRelativePath $destinationFolder
        # Upload the file
        Add-PnPFile -Path $filePath -Folder $destinationFolder
    }
}
Get-PnPFolderItem -FolderSiteRelativeUrl "Shared Documents"

Now, we have three practical solutions to migrate file server to SharePoint Online efficiently. But this procedure will not end until you validate the post-migration steps described in the next section. 

Post-Migration Steps

After migration, validate:

Real-World Example: Manufacturing Firm Migration

A mid-sized manufacturing firm moved 2 TB of data from a legacy Windows Server to SharePoint Online. Using our guide, they performed staged migrations. They reduced data volume by 30% through pre-migration cleanup and successfully migrated their data within a week.

SharePoint vs File Server: A Quick Comparison

Here’s a clear comparison table outlining the key differences between SharePoint Online and a traditional File Server:

Feature SharePoint Online

File Server

Storage Location Cloud-based On-premises physical server
Accessibility Accessible from anywhere with internet Accessible only within a local network
Collaboration Real-time co-authoring, version control & workflows Basic file sharing, no real-time collaboration
Security Built-in Microsoft security, encryption Depending on the on-prem security setup
Backup & Disaster Recovery Automatic cloud backups Manual backups
Cost Model Subscription-based (OPEX) Capital expenditure (CAPEX) for hardware and licenses

Author’s Verdict

Migrating a file server to SharePoint Online is an essential task, as every organization needs the best collaborative environment. In this guide, we explored three tried and tested solutions to migrate file server to SharePoint Online in a few clicks. We assure you that you will get the desired results by following the pre- and post-migration checklists. 

Look no further, leverage SharePoint Online today by performing a file server to SharePoint Online migration!

People Also Ask

Q1. Can SharePoint Online be used like a traditional file server?

Yes, SharePoint Online can serve as a file server, but with enhanced capabilities like:

  • Document libraries (store and manage files)
  • Set permissions(who can access data)
  • OneDrive sync
  • Version history
  • Metadata tagging
  • Anywhere access via the cloud.

Q2. Why Migrate File Server to SharePoint Online?

Moving from a file server to SharePoint Online is a wise decision for various reasons:

  • Real-time collaboration with version control
  • Anywhere, anytime access from web or mobile
  • Enterprise-grade security
  • Integration with Microsoft 365 tools (Teams, Outlook, etc.)
  • No hardware cost

Q3. Which tools are best for migrating files to SharePoint Online?

The best tools for migrating data to SharePoint Online include:

  • Microsoft SharePoint Migration Tool (SPMT): Free tool from Microsoft.
  • Migration Manager: An in-built tool available in the Microsoft 365 Admin center.
  • PnP PowerShell Scripts: Advanced, script-based option.

Q4. Is SharePoint Online a reliable replacement for on-premises file servers?

Yes, SharePoint Online is a powerful alternative to traditional file servers, especially for businesses adopting cloud-first strategies. It provides real-time collaboration and integration with Microsoft 365 apps.